PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00124g00012.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family MYB_related
Protein Properties Length: 97aa    MW: 11298.6 Da    PI: 4.4768
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00124g00012.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding36.61.1e-111054447
                              S-HHHHHHHHHHHHH.TTTT.-HHHHHHHHTTTS-HHHHHHHHHHH CS
           Myb_DNA-binding  4 WTteEdellvdavkq.lGgg.tWktIartmgkgRtlkqcksrwqky 47
                              WT eEd+++ +a+++ lG +  W  Ia++++ ++t  q+k+++q +
  Peaxi162Scf00124g00012.1 10 WTREEDKIFENAIAErLGEDqEWGQIASRIP-NKTIQQVKHHYQLL 54
                              ************97527777***********.***********975 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007173.4E-4657IPR001005SANT/Myb domain
SuperFamilySSF466891.15E-10761IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.604.6E-101055IPR009057Homeodomain-like
CDDcd001672.26E-81055No hitNo description
PfamPF002496.3E-101053IPR001005SANT/Myb domain
PROSITE profilePS500907.5031055IPR017877Myb-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 97 aa     Download sequence    Send to blast
MSEASSTILW TREEDKIFEN AIAERLGEDQ EWGQIASRIP NKTIQQVKHH YQLLVEDIAN  60
IEADLIPLPD YKEEDQVESN VKKEQEKKKK STDKECV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006341637.12e-21PREDICTED: transcription factor DIVARICATA
TrEMBLM1A4202e-22M1A420_SOLTU; Uncharacterized protein
TrEMBLM1A4212e-21M1A421_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000143507e-21(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA2507322
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.14e-18MYB family protein